PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON88862.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 719aa MW: 77263.1 Da PI: 6.5885

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON88862.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.8	4.1e-32	288	345	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y+g Hnh+k PON88862.1 288 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-EGHITEIIYKGAHNHPK 345 7**************************************.*************85 PP
2	WRKY	102.8	1.9e-32	501	559	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+Hnh+ PON88862.1 501 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHD 559 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MFAQDFGSTP PSAPPTATKT DEHLFPGPRE PMVSHPHTQF TEMGSFSQPK SNSTTTPRGG 60 LVERMAARAG FNAPRLNTES IRSSDPSLPS QAPSPYLTIP PGLSPTTLLD SPVFLSNSLA 120 QPSPTTGKFP FFPNGNSKSS TLILEASDKN KDNFFEDINA SSFAFKPVTN ASSSFFLGAA 180 SKLTSAALPQ QPLPSIEVSV QSENSPPGLE PTGVENQKKN NLQLPADFPH ASVEKDYGSN 240 TMSTDQKAFD NAGGSAENSP PLDEQADEGD QKGSGDCSAG GGGATTSEDG YNWRKYGQKQ 300 VKGSEYPRSY YKCTHPNCQV KKKVERSHEG HITEIIYKGA HNHPKPPNRR SAIGSSNSLA 360 DMRMDIPEQA GLQSGGDGDP VWASTQKKTV DWRHDNLEVT SSVSVGPEYC NQSTSLQAQN 420 GTQLESGDAV DASSTFSNDE DEDDRGTHGS VSLGYDGEED ESESKRRKLE AYASATEMSG 480 ATRAIREPRV VVQTTSEVDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTNA GCTVRKHVER 540 ASHDLKSVIT TYEGKHNHDV PAARNSSHVN SGPSGNIPVQ ASAAAAAVQS HVNVHRPEPS 600 SQVHNGMARF ERPATLGSFA LQGAAARQQL VSNSHGFSFG MNQPGLANLT MAGLGTAQHK 660 LPVLSVHPYL AQQRQMNEMG FMLPKGEPKA EPISESGLNL SNGSVYQQLM SRLPLGPQM

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MFAQDFGSTP PSAPPTATKT DEHLFPGPRE PMVSHPHTQF TEMGSFSQPK SNSTTTPRGG  60
LVERMAARAG FNAPRLNTES IRSSDPSLPS QAPSPYLTIP PGLSPTTLLD SPVFLSNSLA  120
QPSPTTGKFP FFPNGNSKSS TLILEASDKN KDNFFEDINA SSFAFKPVTN ASSSFFLGAA  180
SKLTSAALPQ QPLPSIEVSV QSENSPPGLE PTGVENQKKN NLQLPADFPH ASVEKDYGSN  240
TMSTDQKAFD NAGGSAENSP PLDEQADEGD QKGSGDCSAG GGGATTSEDG YNWRKYGQKQ  300
VKGSEYPRSY YKCTHPNCQV KKKVERSHEG HITEIIYKGA HNHPKPPNRR SAIGSSNSLA  360
DMRMDIPEQA GLQSGGDGDP VWASTQKKTV DWRHDNLEVT SSVSVGPEYC NQSTSLQAQN  420
GTQLESGDAV DASSTFSNDE DEDDRGTHGS VSLGYDGEED ESESKRRKLE AYASATEMSG  480
ATRAIREPRV VVQTTSEVDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTNA GCTVRKHVER  540
ASHDLKSVIT TYEGKHNHDV PAARNSSHVN SGPSGNIPVQ ASAAAAAVQS HVNVHRPEPS  600
SQVHNGMARF ERPATLGSFA LQGAAARQQL VSNSHGFSFG MNQPGLANLT MAGLGTAQHK  660
LPVLSVHPYL AQQRQMNEMG FMLPKGEPKA EPISESGLNL SNGSVYQQLM SRLPLGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein