PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON88651.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | FAR1 | ||||||||
Protein Properties | Length: 260aa MW: 29174.7 Da PI: 6.6826 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 89.7 | 4e-28 | 96 | 183 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkw+vtk+++eH H+l+p PON88651.1 96 FYNAYATRIGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHAHPLTP 183 ******************************************9988..9**************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MGETAIDPVE FGVDGDVNGE VLRSSAEVET SRGGEENETG GSSVEGAFQQ DHDEKMNQDS 60 PGGDMIPVGV PTTSLVPADE PYVGQEFDSE AAAHAFYNAY ATRIGFIIRV SKLSRSRRDG 120 TAIGRALVCN KEGYRMPDKR EKIVRQRAET RVGCRAMILV RKVSSGKWVV TKFVKEHAHP 180 LTPGKGRRDC IYDQYPNEHD KIRELSQQLA VEKKRAATYK RHLELIFEHI EEHNESLSKK 240 IQHIVDSVKD VEMKEQQGHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 5e-92 | FAR1 family protein |