PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88570.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 336aa    MW: 36506.1 Da    PI: 7.0641
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.14.4e-17231265135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  PON88570.1 231 CLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 265
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MEVPEFFVGG YFGAGTGGFS AEKRHSEQKP GEHFTIDDLL DFSHDEPMVT DAFFDNNVAG  60
NSTDSSTVTV VDSCNSSVSG GGPHFSGNRS FGDSQFSGDL CVPYDDLAEL EWLSNFVDDS  120
FSAEKDLNAL QFLSASSATT TTNMKPLTPE TSSSSETSRN APFFQPETPL PGKARSKRSR  180
AAPGDWTTRL LHLVTPNNSS NDTKPVKTTP SKKKEGGSGS NANSDSSGRK CLHCAAEKTP  240
QWRTGPMGPK TLCNACGVRY KSGRLVPEYR PAASPTFVSA RHSNSHRKVL ELRRQKELHR  300
AQHQHFLSQS SIFGVSNGGD DYLIHHHGGA DFRHMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-72GATA family protein