PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON88055.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 26837.4 Da PI: 8.1137 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.3 | 9.8e-12 | 55 | 107 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +++ h +Er+RR+++ + ++ Lr+l+P ++K ++ Av+YIk Lq PON88055.1 55 KKMIHRDIERQRRKEMATLYAGLRSLIPLeY---IKGKRATSDHMNGAVDYIKRLQ 107 5778*************************77...9********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MVFHISTITT TSHQQNRIPQ DLIIPTSASV GGHNMGRGQP STKLLKGKED DDYKKKMIHR 60 DIERQRRKEM ATLYAGLRSL IPLEYIKGKR ATSDHMNGAV DYIKRLQMRI TDLGAQRDDL 120 IKKSNLRAPD SMSTSSGSSD NSSTLTSIVV HLCSAGGIEI VLSSSSSNNS TASTSFPLSR 180 VLQVLFEQGL DIVSCTTTKV NERVLLHTIQ AEVADDPTGI NCDQLQEEIK EIISSWNKDL 240 HSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 1e-38 | bHLH family protein |