PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86754.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 316aa    MW: 34483.9 Da    PI: 10.3682
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86754.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.92.8e-30236294259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+y+WrKYGqK++kgs+fpr+YY+C+s  gCp++k+ver+++dp+++++tYe eH+h+
  PON86754.1 236 QDEYSWRKYGQKPIKGSPFPRGYYKCSSVkGCPARKHVERARDDPTMLIVTYEWEHRHS 294
                 7**************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MAIDLMGFSK IEDHAAVQEA ASAGLKSMEH LIRVLSGNHS SGAGSGSETL TLGHLDFREA  60
TDFTVARFKQ VISILNRTGH ARFRRGPPSN PPAESRPDDQ NPDPDDAIRV RCSSKPSLST  120
ESRSEFSSSQ KSKDCLTLSP PMSSNTSTSF VSSVTGDGSV SNGKIGTLLF PPPVPAMSAG  180
KPPLASRKRC HDSAFSGDLT GKTSSASCHC HKRRKNRFKK SIRVPAISSK IADIPQDEYS  240
WRKYGQKPIK GSPFPRGYYK CSSVKGCPAR KHVERARDDP TMLIVTYEWE HRHSTMPVTE  300
NVRNGVVRGL GFQPTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.13e-60WRKY family protein