PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON86574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 253aa MW: 28089.6 Da PI: 7.0362 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.3 | 7.1e-18 | 8 | 53 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed l ++v+q+G+++W++I+ ++ gR++k+c++rw + PON86574.1 8 KGSWSPQEDATLMKLVEQHGPRNWSLISTGIQ-GRSGKSCRLRWCNQ 53 799*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 27.7 | 6.3e-09 | 62 | 90 | 3 | 32 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg 32 ++T+ Ed +++a++++G++ W+tIar ++ PON86574.1 62 PFTPAEDATIIRAHALHGNK-WATIARLLP 90 89******************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MKGGDRIKGS WSPQEDATLM KLVEQHGPRN WSLISTGIQG RSGKSCRLRW CNQLSPSVQH 60 RPFTPAEDAT IIRAHALHGN KWATIARLLP XXXXXXXXXX XXRRRRAAAS ASSDSNSPPK 120 GLGPGPEEED ESSESEPDPA VKRRRLRPSP ERGGGIETSL TLSPPGESVV SVPSAEEKVE 180 NDVVLKREEA VAVAVAVGEE ERCTVDMEME ETCLVTIMQR MIAQEVRNYM DNLRAQDGLR 240 FGFRTSVHRD PYN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 142 | 146 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 1e-40 | MYB family protein |