PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON85181.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 358aa MW: 38485.4 Da PI: 7.7303

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON85181.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112.3	6.9e-35	71	142	2	73
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 a+k+ +++++h kv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ PON85181.1 71 ATKRASTKDRHRKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAM 142 899*************************************************************88888444 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MAMTQRNEAE EEKERRAVDL RINAGEEEEE ERNDEESNGT TSLNEAVVEL KEEPAEPLQI 60 VPVALQVPAP ATKRASTKDR HRKVEGRGRR IRMPAACAAR IFQLTRELGH KSDGETIRWL 120 LEHAEPAIIA ATGTGTVPAI AMSVNGTLKI PTAAPDPEPD DPAQRRKRKR PVNSEYVDVN 180 DGVSVSVSAG LAPLTQTQVQ VQQLQQQPVP RQGLVPMWAI PSNAVVPGAF FVVPPMATTS 240 TTATASTATT QPHIFTFPAS ATPFINISAA RPISSFVSSM ANLVTTPAQL HATTTTTTNL 300 NSTNSVSKPP SSMAAPTGNS GTGAGTKTAT AKTQMLRDFS LEIYDKKELQ FMTRSSKN

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MAMTQRNEAE EEKERRAVDL RINAGEEEEE ERNDEESNGT TSLNEAVVEL KEEPAEPLQI  60
VPVALQVPAP ATKRASTKDR HRKVEGRGRR IRMPAACAAR IFQLTRELGH KSDGETIRWL  120
LEHAEPAIIA ATGTGTVPAI AMSVNGTLKI PTAAPDPEPD DPAQRRKRKR PVNSEYVDVN  180
DGVSVSVSAG LAPLTQTQVQ VQQLQQQPVP RQGLVPMWAI PSNAVVPGAF FVVPPMATTS  240
TTATASTATT QPHIFTFPAS ATPFINISAA RPISSFVSSM ANLVTTPAQL HATTTTTTNL  300
NSTNSVSKPP SSMAAPTGNS GTGAGTKTAT AKTQMLRDFS LEIYDKKELQ FMTRSSKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	165	170	RRKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-55	TCP family protein