PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON85028.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | C2H2 | ||||||||
Protein Properties | Length: 370aa MW: 42890.6 Da PI: 8.36 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11 | 0.0014 | 18 | 40 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++Cg + s ks+ ++Hi tH PON85028.1 18 YFCEYCGICRSKKSLITSHILTH 40 78********************6 PP | |||||||
2 | zf-C2H2 | 18.7 | 4.6e-06 | 63 | 85 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cg + + + +Lk+H+++H PON85028.1 63 YTCEECGVTLKKPAYLKQHMQSH 85 9********************99 PP | |||||||
3 | zf-C2H2 | 17.9 | 8.4e-06 | 91 | 115 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ dC s++rk++L+rH+ H PON85028.1 91 YVCSvdDCRSSYRRKDHLTRHLLGH 115 99*******************9877 PP | |||||||
4 | zf-C2H2 | 14.9 | 7.5e-05 | 120 | 145 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ Fs + n+krH + H PON85028.1 120 FKCPieNCKREFSIQGNMKRHVKEqH 145 89********************9988 PP | |||||||
5 | zf-C2H2 | 17.6 | 1e-05 | 160 | 184 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F+ s L++H +H PON85028.1 160 YVCQeaGCGKAFRFASKLRKHEDSH 184 99*******************9888 PP | |||||||
6 | zf-C2H2 | 17.1 | 1.5e-05 | 251 | 275 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC C+ sFs+ksnL++H + H PON85028.1 251 KCMykGCDHSFSTKSNLNQHVKAaH 275 577779**************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 370 aa Download sequence |
MDEAGGEERP IFRDIRRYFC EYCGICRSKK SLITSHILTH HKEELDEARA EEDNATEGVK 60 GSYTCEECGV TLKKPAYLKQ HMQSHSTERP YVCSVDDCRS SYRRKDHLTR HLLGHKGILF 120 KCPIENCKRE FSIQGNMKRH VKEQHNGDHP STSTESEKQY VCQEAGCGKA FRFASKLRKH 180 EDSHVKLESV EAVCAEPGCM KIFTNEQCLK EHIHSCHQHI ACEICGTKQL KKNLKRHLRT 240 HEEKGPFERI KCMYKGCDHS FSTKSNLNQH VKAAHLKQKP FACSFSGCGL RFSYKHVRDN 300 HEKTGCHVYT HGDFEEADEQ FRSRPRGGRK RKYPTVEMLV RKRVSPPNQL DGPFGCFLNF 360 LWQDEEQDEP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 324 | 332 | RPRGGRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-147 | C2H2 family protein |