PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85018.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 284aa    MW: 30843.6 Da    PI: 9.2041
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85018.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA611.5e-19205239135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  PON85018.1 205 CQHCGAEKTPQWRAGPHGPKTLCNACGVRYKSGRL 239
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MESLDPAACL MDDLLNFSSD IGEEDEEDDK PNRALASSLK PSGLLDPVDT IRPFHELVEE  60
ELEWISNKDA FPAVESFILS DHPGSGVVVS KLHSPVSVLE GGSANSSSSN NSHSSNSSNA  120
TSLTSCFGGL KAPCRTRGKR RCRRRRASYA DITGRKLCWS QANNNNNNSS CSKINGNGAK  180
AEKVKPKTKT ATTTTRMTTT IGRKCQHCGA EKTPQWRAGP HGPKTLCNAC GVRYKSGRLV  240
PEYRPASSPS FSSEVHSNSH RKILEMRKVK QVMGMVVKHP LESG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.16e-41GATA family protein