PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON84778.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ZF-HD
Protein Properties Length: 267aa    MW: 28408.5 Da    PI: 7.6457
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON84778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.32.9e-3156111359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  k rY+eClkNhA+ +Ggha+DGCgEf+++ g+egt +alkCaAC CHRnFHR+e+e+
   PON84778.1  56 KPRYRECLKNHAVGMGGHALDGCGEFLAA-GAEGTLDALKCAACSCHRNFHRKETES 111
                  679*************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MDFEDQEEQD EEMEMAASYD SLGNSGSGRV KMPSSGGGQA EGVMAQSASA AAQPRKPRYR  60
ECLKNHAVGM GGHALDGCGE FLAAGAEGTL DALKCAACSC HRNFHRKETE SVGPSGGLTG  120
AEPAYGGPLV PHYPHPPFSP YYRAPTGYLH VAPHHRPLAL PSTSGGGAGS HSREDQEDVS  180
NPSGGGGGGG GGSGYGFGSG SSNKKRFRTK FSQEQKERML GLAERLGWRI QKQDEELVQQ  240
FCNETGVKRH VLKVWMHNNK HTLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.14e-65ZF-HD family protein