PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON84150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NAC | ||||||||
Protein Properties | Length: 209aa MW: 23857.3 Da PI: 9.4198 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59.7 | 9.9e-19 | 6 | 78 | 54 | 127 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 e+++wyfF++rd+k++ g+r r + +gyW+ +g k+v+s +g+++g k+ +vfy g+ p+g +tdW + y+ PON84150.1 6 EDEKWYFFTTRDRKHKIGDRVDRFAGNGYWRRSGGGKDVVS-DGSKIGKKEHFVFYIGKPPSGLRTDWNIYKYK 78 5789*******************99****************.999*************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MYKPYEDEKW YFFTTRDRKH KIGDRVDRFA GNGYWRRSGG GKDVVSDGSK IGKKEHFVFY 60 IGKPPSGLRT DWNIYKYKRA TTRRKKEDGE AIEHNLEGQV HPSEENNNNE PALRQSRKKR 120 RIDLSGLCNN GNGTKSYSNK PAATDELDIF EDFTAPTILS PNPFGGSTIP PTNGNNPLYL 180 ELMIEHEAAN HRTTTQQQHP DNQQGPTNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15500.1 | 6e-14 | NAC family protein |