PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON83774.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 279aa MW: 30886.4 Da PI: 10.1956 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 346.5 | 6.4e-106 | 1 | 279 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkllalll 86 mddd+ + rn+gyyep+ +k +lglqlmss+aerd+k r+ + + + ++++++rd m++ rd ++++ ++k+l++l+ PON83774.1 1 MDDDALNMRNWGYYEPS--FKGHLGLQLMSSMAERDTKAflpgRDPTTVMVSANGTFHPRDcvvsdapvpMNY-VRDGWVNQ--------RDKFLNMLP 88 9***9999*******99..************************999999************************.99*****9........789****** PP GAGA_bind 87 venslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesade 185 ++ ++ vl++t+ ++slq+ l+++ ++ r+e+ + + e++ ++ke+ +kkrq + pk++k kk++k +k++++++ + PON83774.1 89 ATP--------NYAVLPETSGAHSLQM-----LQPPDTQ-RDER---VGRV-EEPVVNKESGPSKKRQGGGAPKAPKVKKPRK--PKENNNSAV----P 163 655........4899************.....5544444.2222...3333.3466778888889999999999999999999..333333333....5 PP GAGA_bind 186 rskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvD 284 r k kks+d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++SvyPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++np+D PON83774.1 164 RLKPAKKSMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPID 262 689************************************************************************************************ PP GAGA_bind 285 LkdhWAkHGtnkfvtir 301 L++hWA+HGtnkfvtir PON83774.1 263 LRTHWARHGTNKFVTIR 279 ****************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MDDDALNMRN WGYYEPSFKG HLGLQLMSSM AERDTKAFLP GRDPTTVMVS ANGTFHPRDC 60 VVSDAPVPMN YVRDGWVNQR DKFLNMLPAT PNYAVLPETS GAHSLQMLQP PDTQRDERVG 120 RVEEPVVNKE SGPSKKRQGG GAPKAPKVKK PRKPKENNNS AVPRLKPAKK SMDVVINGID 180 MDISGIPIPV CSCTGTPQQC YRWGCGGWQS ACCTTNVSVY PLPMSTKRRG ARIAGRKMSQ 240 GAFKKVLEKL AAEGYNFANP IDLRTHWARH GTNKFVTIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 1e-111 | BBR-BPC family protein |