PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON83415.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 333aa    MW: 37150 Da    PI: 6.0737
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON83415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.2e-0958105354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+iL+ +++ +k+L
  PON83415.1  58 LQKADREKLRRDRLNEQFIELGNVLDPD----RPKNDKATILTDTIQLLKDL 105
                 56778*******************9997....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MNQLEHDDFI QTPPHPNPPL SEFRQTPSDP RLPSTRSQPS SSQRSEGEIK DGVAARKLQK  60
ADREKLRRDR LNEQFIELGN VLDPDRPKND KATILTDTIQ LLKDLTSQVN KLKSEYASLT  120
EEARELTQEK NDLREEKSSL KSDIENLNVQ YQQRMRTMFP WAAMDHSVVM APPSYPYPVP  180
MPLAPGPIPM HPHMQPYPFY GNQNPGVIPN PCSTFVPYIT PSTLVEQQSQ QYVSPIIQPG  240
SRSNVSGKQD SRNKSSGESK IGKSEDSNDV ATNLELKTPG SATDQDSGQG QSQRSVSKEN  300
NITERSSSSR CSSSRSVQDS SSNSIVSSRE PND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-87bHLH family protein