PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON82883.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 294aa MW: 33639.2 Da PI: 6.5638

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON82883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	137.4	9.4e-43	7	139	3	127
NAM 3 pGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pGfrF Pt+eel+++yL++k++g++ +++vi+ +diy+++PwdLp+ ++++ ++++fF++r++++a+g r++r t+sgyWkatg+ v+ PON82883.1 7 PGFRFYPTEEELISFYLHNKLDGQReelnRVINRVIPLLDIYEFNPWDLPQysgvPCQGDPEQCFFFIPRQESEARGGRPSRLTESGYWKATGSPSYVY 105 9**********************55433334468888*******64655444566799******************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyr 127 s++++ +glk+t+vfy+grap+g+kt+W m+ey+ PON82883.1 106 SSQNRIIGLKRTMVFYRGRAPHGTKTQWKMNEYK 139 *******************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MEDNSIPGFR FYPTEEELIS FYLHNKLDGQ REELNRVINR VIPLLDIYEF NPWDLPQYSG 60 VPCQGDPEQC FFFIPRQESE ARGGRPSRLT ESGYWKATGS PSYVYSSQNR IIGLKRTMVF 120 YRGRAPHGTK TQWKMNEYKA IQGEPISGAT PMLRQEFSLC RVYKKTKCLR AFDRRPTRDE 180 IINFNPTIHD HHDNHQQAHD GHDHHQYHHH EASTTSTRLS RSPPPPPPPP PPPPAAPAVM 240 ERTSSLEETS TSSGGGGSTG GQPSQSGESE YLHLHTTADN EALWDWEDIN FFYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	2e-74	NAC family protein