PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON82344.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | C2H2 | ||||||||
Protein Properties | Length: 407aa MW: 46637.7 Da PI: 8.4603 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.8 | 0.0016 | 26 | 48 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++Cg + s ks+ +Hi tH PON82344.1 26 YFCEYCGICRSKKSLIASHILTH 48 78********************6 PP | |||||||
2 | zf-C2H2 | 20.8 | 1.1e-06 | 73 | 94 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +Lk+H+++H PON82344.1 73 TCEECGVTFKKPAYLKQHMQSH 94 6*******************99 PP | |||||||
3 | zf-C2H2 | 17.8 | 9.5e-06 | 128 | 152 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ dC s++rk++L+rH+ H PON82344.1 128 YVCSvdDCRSSYRRKDHLTRHLLGH 152 99*******************9877 PP | |||||||
4 | zf-C2H2 | 13.5 | 0.00021 | 157 | 182 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kC+ +C + Fs + n+krH r H PON82344.1 157 FKCSieNCRREFSIQGNMKRHVREqH 182 89*********************988 PP | |||||||
5 | zf-C2H2 | 17.5 | 1.2e-05 | 197 | 221 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F+ s L++H +H PON82344.1 197 YVCQeaGCGKAFRFASKLRKHEDSH 221 99*******************9888 PP | |||||||
6 | zf-C2H2 | 16.5 | 2.3e-05 | 288 | 312 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC C+ +Fs+ksnL++H + H PON82344.1 288 KCMykGCDHTFSTKSNLNQHVKAaH 312 577779**************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 407 aa Download sequence |
MEKEAGGGGG GGEERPIFLF RDIRRYFCEY CGICRSKKSL IASHILTHHK EELDKARTEE 60 EGDATEGVKG SNTCEECGVT FKKPAYLKQH MQSHSPEYQV GRPPEKLHQE GLNHATFLVF 120 VILSQRPYVC SVDDCRSSYR RKDHLTRHLL GHKGKLFKCS IENCRREFSI QGNMKRHVRE 180 QHNGDNPSTS TESEKQYVCQ EAGCGKAFRF ASKLRKHEDS HVKLDSVEAV CAEPGCMKIF 240 TNEQCLKEHI HSCHQHITCE VCGTKQLKKN LKRHLRTHEE KGPVESIKCM YKGCDHTFST 300 KSNLNQHVKA AHLKQKPFVC SFSGCGARFS YKHVRDNHEK TGCHVYTHGD FEEADEQFRS 360 RPRGGRKRKY PTVEMLVRKR VSPPNQLDGS FGCFSNFLCQ DEEQDEP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 361 | 369 | RPRGGRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-143 | C2H2 family protein |