PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON81835.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 334aa    MW: 36685.4 Da    PI: 4.6667
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON81835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.3e-21117167155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +grW+AeIrdps    r +r++lg+f+taeeAa  +++a+ +l+g
  PON81835.1 117 PKFRGVRRRP-WGRWAAEIRDPS----RrTRVWLGTFDTAEEAALSYDRAAIRLKG 167
                 79********.**********84....34************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDSVKFSEHR TVTVVRSSHL VKKNDFKVVR ISVTDEDATD SSSGEEEGGG GGEEMRVKRH  60
VTELRFEGCC PNRRLPPGGR SAAAKPKSDE QRGRGGGGAA GPCKSAAAAE RYFPHGPKFR  120
GVRRRPWGRW AAEIRDPSRR TRVWLGTFDT AEEAALSYDR AAIRLKGPGA LTNFGCGYRN  180
PSNDVDVVVV DGDGGVVVVD DDAVAVVSDY DSGKESQVLS SPTSVLRYQP LDSKQPQCTD  240
TTDAKTGTDH CSRPPAQPQV APTEEEWIIE NENGNDFSFS ESYLWSHYCE GPAPLFGDEF  300
VLPDKIPEED WGDVLVDLDQ DFGSCKWDVD QFFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-35ERF family protein