PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON81631.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 291aa MW: 32805.1 Da PI: 8.271 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.1 | 8.4e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+t Ed++l+d+vk +G g W+ +++ g++R++k+c++rw++yl PON81631.1 14 RGAWSTMEDKILADYVKIHGEGKWRDLPQRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.9 | 1.7e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +t+E++l+v+++k+lG++ W++Ia +++ gRt++++k++w++ PON81631.1 67 RGNISTDEEDLIVRLHKLLGNR-WALIAGRLP-GRTDNEIKNYWNTN 111 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 291 aa Download sequence |
MGRKPCCEKE GLNRGAWSTM EDKILADYVK IHGEGKWRDL PQRAGLKRCG KSCRLRWLNY 60 LRPNIRRGNI STDEEDLIVR LHKLLGNRWA LIAGRLPGRT DNEIKNYWNT NLRKRVLDNI 120 GIKGQSSSEE LVKPATKRTQ LTAQQSSGHV IRTKAVRCSK VAIPSWLLLD DQDKNIIGQN 180 SVPLKEILSD QSKSRSFSSS TTTSENVNSS DFLIDFDFGK VLMSDDIDHQ AKDRTGKSIG 240 PSSVDQIARC SFDDIYDPYL LVGDPFYQGL DDLDEISCFL NSGGEDQLVI N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G35550.1 | 3e-65 | MYB family protein |