PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON81351.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | C2H2 | ||||||||
Protein Properties | Length: 392aa MW: 44355.1 Da PI: 7.488 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18 | 8.2e-06 | 219 | 238 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + Cp C+ksF+r nL+ H+ PON81351.1 219 FHCPLCSKSFNRYNNLQMHM 238 78*****************9 PP | |||||||
2 | zf-C2H2 | 15.2 | 6.2e-05 | 303 | 325 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k+F k + ++H +++ PON81351.1 303 FRCRKCDKPFAVKGDWRTHEKNC 325 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 392 aa Download sequence |
MTNPHSNLFN GWINFISLHP YGHSPFTSPN YNSSNTTTTN NNNIHCFNNS NLLPHHANCS 60 NNQQLISRKY QLPYYSFSSD NNNINVLSSS LPFKEALPLI DKLKPLGNTP DHHHQQQLLS 120 SSTKTEDQAG SDHHNKNDDD DDADADEKTR VTVALHIGLP RPNSDEAGVG SGVMADIKEL 180 RGVMSSDHVV CSWDRQGEAT SHPHWIPTPS QILVGPTQFH CPLCSKSFNR YNNLQMHMWG 240 HGSQYRKGPE SLKGSQPTAM MRVPCYCCWP GCKHNISHPR ARPLKDFRTL QTHYKRKHGS 300 KPFRCRKCDK PFAVKGDWRT HEKNCGKIWY CICGSDFKHK RSLKDHVKAF GRGHAAFDDH 360 LQCLDDDDDN DEDEPASQIE QDASCSPPSY DN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51220.1 | 1e-104 | C2H2 family protein |