PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON81253.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Nin-like
Protein Properties Length: 254aa    MW: 29707.9 Da    PI: 6.3115
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON81253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK77.51.5e-24144192452
      RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 e++l+d++kyF+ pik+AAk L v++T LK++CR+++I+RWPhRk+ksl
  PON81253.1 144 ELELDDIQKYFDVPIKEAAKGLRVGVTRLKKRCRELNIMRWPHRKLKSL 192
                 7999*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MEYSAQLIVP KIENPLGFDW LFHENPSENL LPDFPPVQTF FEPNYPLPFS YLYDQLPSID  60
FQNFEDIDGG FFFDNAFSYC EDPMVDEKPK TNLVTSFSHN NKNLTSDQIG FEVSRLIESE  120
IFGSSEKNEE ETRSCGRRKK KVVELELDDI QKYFDVPIKE AAKGLRVGVT RLKKRCRELN  180
IMRWPHRKLK SLKYLLNNVK KMGLNSNEIM MLEEQQRLLE VAPDMDLTER AKKLRQACFK  240
ANYKSKRSLE AARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.12e-35Nin-like family protein