PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON81197.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

GRF

Protein Properties

Length: 552aa MW: 58746.5 Da PI: 6.5094

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON81197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77	1.9e-24	166	209	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 daepgrC+RtDGKkWRCsr+v +++k+CErH++rgrsrsrk++e PON81197.1 166 DAEPGRCKRTDGKKWRCSRDVAPDQKYCERHMNRGRSRSRKHVE 209 79****************************************98 PP
2	QLQ	55.7	1.5e-19	106	139	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT+aQl +L++Q+++yKy++a++PvP+eLl++ PON81197.1 106 PFTNAQLKELERQAMIYKYMVASVPVPHELLFPF 139 8******************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MACEFDDYDD DDLDLQNDHH RQFQYSKVVD LDGPTSNTTP RTDDIYDVAA PAAAPVVFGG 60 GAALTTLQPF HNTCYSPSST TTNTTAVSYN ALKSPGGAMA ASVGFPFTNA QLKELERQAM 120 IYKYMVASVP VPHELLFPFT RNLSASAVSH YPFGSEFKVR FSNGRDAEPG RCKRTDGKKW 180 RCSRDVAPDQ KYCERHMNRG RSRSRKHVEV QINNNNNNNN SNKRTRHDNS NSNHHALSAI 240 SSSATLATDS NISHNHFLGS APALPYHPSP VFESVPSLSA DKDGRSLEWM MKGEAVAMAA 300 SDPRWLHLMQ TRMEIPSKPS FNNTSIFSHH AEEEPFLNLN SYASFGTGGG GGGGGGGGGD 360 EQDREYGLFL DPEAVALDNQ TNSETPRSFI DAWSKTGMEE TMAHSTGGVN QSSVSSQGKL 420 SPSSLTLSMG GSGSINGEMG RTQIGSRFNG SDTKSHVTSW LTPAPWVASR PGGPLAEVLR 480 PSSVTATTSA ASDPSSPFAG YGDSGSPPAT AVSSPSGVLQ KTVASLSDSS GCSSPALASS 540 KVNAEIALVG TR

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MACEFDDYDD DDLDLQNDHH RQFQYSKVVD LDGPTSNTTP RTDDIYDVAA PAAAPVVFGG  60
GAALTTLQPF HNTCYSPSST TTNTTAVSYN ALKSPGGAMA ASVGFPFTNA QLKELERQAM  120
IYKYMVASVP VPHELLFPFT RNLSASAVSH YPFGSEFKVR FSNGRDAEPG RCKRTDGKKW  180
RCSRDVAPDQ KYCERHMNRG RSRSRKHVEV QINNNNNNNN SNKRTRHDNS NSNHHALSAI  240
SSSATLATDS NISHNHFLGS APALPYHPSP VFESVPSLSA DKDGRSLEWM MKGEAVAMAA  300
SDPRWLHLMQ TRMEIPSKPS FNNTSIFSHH AEEEPFLNLN SYASFGTGGG GGGGGGGGGD  360
EQDREYGLFL DPEAVALDNQ TNSETPRSFI DAWSKTGMEE TMAHSTGGVN QSSVSSQGKL  420
SPSSLTLSMG GSGSINGEMG RTQIGSRFNG SDTKSHVTSW LTPAPWVASR PGGPLAEVLR  480
PSSVTATTSA ASDPSSPFAG YGDSGSPPAT AVSSPSGVLQ KTVASLSDSS GCSSPALASS  540
KVNAEIALVG TR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	4e-35	GRF family protein