PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON78242.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 299aa MW: 32808.6 Da PI: 6.4429

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON78242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.7	6.2e-34	18	72	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl PON78242.1 18 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVNGLTIYHVKSHLQKYRL 72 79****************************************************8 PP
2	Myb_DNA-binding	63.3	4.8e-20	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ PON78242.1 20 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvNGLTIYHVKSHLQKYR 71 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MDTINGGNSL NNPNLASKQR LRWTHELHER FVDAVAQLGG PDRATPKGVL RVMGVNGLTI 60 YHVKSHLQKY RLAKYLPDSS SDGKKADKKE PGDMLSNMEG SSGMQITEAL KLQMEVQKRL 120 HEQLEVQRQL QLRIEAQGKY LKKIIEEQQR LSGVLSDAPG LGDNHPESDK TEPATPAPTS 180 ETPLGLLDKT AKEHTSAKSL SVDESLSSHH EPSTPDSGCH VGSPAQSPEG ERSVKKQRVS 240 MNGAYANPEL VLTHQILESS LNSSYQQPQS VFLTREQFES SGNTVGSEDQ LEKVTGNDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-103	G2-like family protein