PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76141.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family E2F/DP
Protein Properties Length: 289aa    MW: 32246.2 Da    PI: 8.1007
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP57.52.3e-18771382471
     E2F_TDP  24 ivtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                  +t ++va+e++s+               d+kn+rRR+YD+lNVL+al++i++ +k+ei+wkg
  PON76141.1  77 LLTSSQVADEIISDfagtdnqtpvsldqfDEKNIRRRVYDALNVLMALGIITR-DKKEIQWKG 138
                 678899***********************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDEEGEKQKQ KQKHSTATAT ATANPLVDYA NLDHTPNNKP SHNHNHSNNP QNKKRPSRII  60
GGGLRQFSVI GLSVVALLTS SQVADEIISD FAGTDNQTPV SLDQFDEKNI RRRVYDALNV  120
LMALGIITRD KKEIQWKGLP SLDIKEQEEL KAMRVKLVNR IGKKSAYLND LKEQIAGFQH  180
LISRNKQLLD RGNSPLEGFS LPFLLVQTSS HATVEIEISE DMQLVHFDFN STPFSLHDDA  240
YILKLLRRHQ LPESGDISQS PSVVSSSSSG IASGGTKPFH WNSEAHTHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02470.31e-75E2F/DP family protein