PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67189.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 340aa    MW: 37161.1 Da    PI: 9.9814
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67189.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.41.1e-31269326359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  PON67189.1 269 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLVVTYEGEHNHS 326
                 99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MAVDFMGYRS ENFSAKLEES AAVKEAASGL ESVEKLIRLL SQTPAQAQAQ DQTSTSSCVH  60
NHQREMYQPP LEIEMDCRAV ADVAVSKFRR VISLLSRTRT GHARFRRGPL AAQAQAQAPV  120
QEKPSSETRV YYATPIQQIP PQAENGVVIP KSRVIDRKDS SSTTINFSYS SAATSFMSSL  180
TGDSDSQKPS LSSPAFQITN LSQVSSAGKP PLSTTTSLKR KCSSETLGSG KCASGSSGRC  240
HCTKKRKMRM KRVVRVPAIS LKMADIPPDD YSWRKYGQKP IKGSPHPRGY YKCSSVRGCP  300
ARKHVERALD DPSMLVVTYE GEHNHSLSVA EASNLILESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.11e-76WRKY family protein