PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67055.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ZF-HD
Protein Properties Length: 354aa    MW: 38761.8 Da    PI: 8.4476
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.41.5e-3250106257
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57 
                  + v Y+eClkNhAas+Ggha+DGCgEfm+ +++  +++++lkCaACgCHRnFHRr++
   PON67055.1  50 MVVSYRECLKNHAASIGGHALDGCGEFMQCPTAVpTDPTSLKCAACGCHRNFHRRDQ 106
                  5789**************************99999********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MDLSPTPTNT TRTTPDTDTE TPPLPPPTRS LSFTNGTLKR HHHLHAPPQM VVSYRECLKN  60
HAASIGGHAL DGCGEFMQCP TAVPTDPTSL KCAACGCHRN FHRRDQPEGP TSTSKHLLHG  120
FHNGTTQFQI LHPPPPSLPR QHGRSSSPSL SPGPSSSPGP TPSPHSPPPV SHLPPNSFFA  180
SPPQMLLALS TGFSPGPSDD HHHQQTHQSF NPTAAVKSSE TNPSSRKRFR TKFSQEQKEK  240
MCLFAEKVGW KMQRSEERLV EEFCREIGVR RGVLKVWMHN NKHTLGKRDR AAGSHNHNLV  300
DEAASNGDNI NGGGSRVLSF DSNPDNETNI GENQNDEDRR ANFNFFANGS SSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.15e-57ZF-HD family protein