PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65520.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 292aa    MW: 31843.6 Da    PI: 6.7397
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021105127123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C  C + F++   L  H+++H
  PON65520.1 105 YTCAFCRREFRSAQALGGHMNVH 127
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MATELGLLSL THLHKLAQSQ DNQTQNQNQN QNHIQNNQDH HQLNPNTLTT PSTFTTTTST  60
APTPWMWNPK AHHHNQEAEE DSWEVRAFAE DTGNVMGTTW PPRSYTCAFC RREFRSAQAL  120
GGHMNVHRRD RARLHQVMPP PNSIINHHHH ATTASASSTS SSTSSFLIPA REFVAANGSS  180
GGLCLVYPFP NPNYSAATFS SINPPTSTAL NACTDHHQPS PSPSTLLSIS PYLPGNLAGG  240
GARPPGAGST STSNYFNAYP HRAEESSDHS SHHDENEELD LELRLGHGPT PS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.17e-32C2H2 family protein