PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON63267.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 443aa    MW: 48894.9 Da    PI: 7.7012
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON63267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.61e-163074147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+
       PON63267.1 30 REKWTDEEHQKFLEALKLYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 74
                     789*******************.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    
MVVEGEGMGL KEMYDSATKV RKPYTITKQR EKWTDEEHQK FLEALKLYGR GWRQIEEHVG  60
TKTAVQIRSH AQKFFSKVVR GSTGSVEVSM QPIEIPPPRP KKKPMHPYPR KSADSLNVSV  120
FNQSERSPSP NFTRSVKGLK SPTSVLSTHG SDALGSAASD QHSRSPSSMS CTTDIQLISL  180
SPSEKENDHL LSNSSTDEQR SLPTNGISAC STLENMLTVK FESCAKDTEH TKEEAKLSAS  240
TSFKLFGRTV LLSDLGKEPP SGVEVSKTLK ADQGLVLKLS RDQLDTDLSL GGVVSDCNPL  300
ECGAPIKPLE QQKESSNAVK ADASMLWWSS YQLPFHYVVA YNSSIDQTSP NSCAEEKMED  360
KEAQKERSCT DSNEDSTTGV ETLGGKNIEA VKSFSQELRT RGSVEPCNSR KGFVPYKRCL  420
AERDNGSSVI ISNDRERQKI RVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18330.17e-46MYB_related family protein