PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON62935.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NAC | ||||||||
Protein Properties | Length: 248aa MW: 28514.9 Da PI: 6.1023 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.1 | 1.5e-48 | 4 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Pt+eelv++yL++k+e+k+ ++++vik +diy++ePwdLpk +++++++w+fF++r++++a+g r+nr+t+sgyWkatg+ v+s+ PON62935.1 4 LPPGFRFYPTEEELVSFYLRNKLEAKRDDINRVIKVIDIYSIEPWDLPKysgeLCQGDTEQWFFFTPRQEREARGGRPNRTTASGYWKATGSPSYVFSS 102 79****************************99****************656654455777*************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kkt+vfykg+ap+g+kt+W m+eyr+ PON62935.1 103 DNRVIGVKKTMVFYKGKAPTGRKTKWKMNEYRA 135 *******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MQELPPGFRF YPTEEELVSF YLRNKLEAKR DDINRVIKVI DIYSIEPWDL PKYSGELCQG 60 DTEQWFFFTP RQEREARGGR PNRTTASGYW KATGSPSYVF SSDNRVIGVK KTMVFYKGKA 120 PTGRKTKWKM NEYRAIEEVN NPNSVTTPML RHEFSLCRVY VISGSFRAFD RRPIKSIRDT 180 REQQGDQAGP SAQNTITMVE RAASSSPETS SSGDPAELPM AAGSGSTEWE MNDNLEQPLW 240 EWEQLNWP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 2e-94 | NAC family protein |