PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON61903.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | YABBY | ||||||||
Protein Properties | Length: 218aa MW: 24375.9 Da PI: 8.2538 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 229.1 | 1.1e-70 | 13 | 178 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkv.vtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvs 97 ++ s s+q+Cyv+CnfC+t+lavsvPs+slfk+ vtvrCGhC++llsvn++ + + h+++++ + lle+ ++ +n+ ++++ +++ v PON61903.1 13 HHLSPSDQLCYVHCNFCDTVLAVSVPSESLFKMnVTVRCGHCSNLLSVNMRGLL-FPPNQLHFGHAFFTPqhLLEDIRSPPSNM--LMINQPNPNDLVM 108 68899**************************866*************9988765.56778889998876523677777776665..5555555544443 PP YABBY 98 seklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + ++ee+p++p v+rPPekrqrvPsaynrfik+eiqrika+nPdish+eafsaaaknWahfP+ih gl PON61903.1 109 P---MRGRTEEIPKPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHKEAFSAAAKNWAHFPHIHLGL 178 3...368999****999*****************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MSASSAAAFS PDHHLSPSDQ LCYVHCNFCD TVLAVSVPSE SLFKMNVTVR CGHCSNLLSV 60 NMRGLLFPPN QLHFGHAFFT PQHLLEDIRS PPSNMLMINQ PNPNDLVMPM RGRTEEIPKP 120 PVVNRPPEKR QRVPSAYNRF IKDEIQRIKA GNPDISHKEA FSAAAKNWAH FPHIHLGLMP 180 DQPVKKPNIR QQEADDMIMK DGFFSTTTPA ANVGVSPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 1e-88 | YABBY family protein |