PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON58798.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 349aa MW: 39894.8 Da PI: 7.5993

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON58798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.7	6.6e-51	33	163	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..... 95 pGfrFhPtdeelv +yL++kv++k++++ + ik++diyk++PwdLp ++++a++kewyfF+kr +ky+++ r+nr+t sg+Wkatg dk+v+s+ PON58798.1 33 PGFRFHPTDEELVGFYLRRKVDRKPISI-DLIKSIDIYKYDPWDLPkASCTAGDKEWYFFCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVHSHgegnn 130 9*************************.99***********66778899***********************************976554 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkktLv+y+g+a kg+ktdW+mhe+rl PON58798.1 131 TTKCIGLKKTLVYYRGSAGKGTKTDWMMHEFRL 163 4445*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MGSSVNTNYT TKVSHVLADD HHDQDQVEDV PLPGFRFHPT DEELVGFYLR RKVDRKPISI 60 DLIKSIDIYK YDPWDLPKAS CTAGDKEWYF FCKRGRKYKN SIRPNRVTGS GFWKATGIDK 120 PVHSHGEGNN TTKCIGLKKT LVYYRGSAGK GTKTDWMMHE FRLPTINDTI TTTTAATANA 180 IRPNNATKSD PQEAEIWTLC RIFKRNVSYR KYTSDWRELS AKVRHPLMET SSKKCSMEYS 240 NNNNMVNRSE ASNYIDFSTP VVYHEEKKPI INHIMNNGIG TTNQLQYVSQ LSSMSMAMSH 300 LSSMDSLMSS FSSCQDDQEQ KNDQIFTSAD WDELRDIVEF ASTLDPDLV

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MGSSVNTNYT TKVSHVLADD HHDQDQVEDV PLPGFRFHPT DEELVGFYLR RKVDRKPISI  60
DLIKSIDIYK YDPWDLPKAS CTAGDKEWYF FCKRGRKYKN SIRPNRVTGS GFWKATGIDK  120
PVHSHGEGNN TTKCIGLKKT LVYYRGSAGK GTKTDWMMHE FRLPTINDTI TTTTAATANA  180
IRPNNATKSD PQEAEIWTLC RIFKRNVSYR KYTSDWRELS AKVRHPLMET SSKKCSMEYS  240
NNNNMVNRSE ASNYIDFSTP VVYHEEKKPI INHIMNNGIG TTNQLQYVSQ LSSMSMAMSH  300
LSSMDSLMSS FSSCQDDQEQ KNDQIFTSAD WDELRDIVEF ASTLDPDLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	2e-80	NAC family protein