PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57722.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 292aa    MW: 31930.1 Da    PI: 7.1486
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17195229135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  PON57722.1 195 CTHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 229
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MDHVYGSMSA QAECFGIDDL LDLSNDDHFF SSSSSDSDPH HHHHHHHHHH HCLPPLLPQT  60
SSSASASTHF IDTPHHDFTS ELCVPSDDVA ELEWLSRFVD DSFSDLPAGE IAGALTFPND  120
ASFSGRARSK RSRVPAAAPA SASGRGCGGG GNTGWGSLSS TTTTTTAELE SPVVAKPKSK  180
QREASPVSGG GARRCTHCAS EKTPQWRTGP MGPKTLCNAC GVRYKSGRLV PEYRPAASPT  240
FVLTQHSNSH RKVMELRRQK ELIRQQQQPE EEQRHQQGQF YSHSQHHGFQ VC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.18e-65GATA family protein