PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON50704.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 274aa    MW: 30801.6 Da    PI: 6.3357
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON50704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-20106156155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +grW+AeIrdp+    r kr++lg+f+taeeAa  +++a+ kl+g
  PON50704.1 106 KKFRGVRRRP-WGRWAAEIRDPT----RrKRVWLGTFDTAEEAATVYDQAAVKLKG 156
                 59********.**********84....34************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MIDYYHKALS DPTIKFTEHK TTTRKLLPDP KPMTRVRQKV VRVIITDADA TDSSSDEDEE  60
KMSVRRVKRH VREINLERPP PPPPAKQDRV PKGPLKSPES DLVRRKKFRG VRRRPWGRWA  120
AEIRDPTRRK RVWLGTFDTA EEAATVYDQA AVKLKGANAV TNFPNSVTTE TTAAVTGVEV  180
LGSENKEKEK EKEKESSSTE SSESDGGATS SPTSVLRFDE PTPFGGFGYF DFDAETFGFD  240
FDGPLGLPDV MLSRKSQGLA EVEFSEFDLM DVVF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104114RRKKFRGVRRR
2112131RRRPWGRWAAEIRDPTRRKR
3128155RRKRVWLGTFDTAEEAATVYDQAAVKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-24ERF family protein