PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON50352.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | C2H2 | ||||||||
Protein Properties | Length: 145aa MW: 16274.9 Da PI: 4.3458 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.7 | 8.7e-05 | 126 | 142 | 1 | 17 |
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 ++C+ C k+F+r nL+ PON50352.1 126 FSCHVCFKTFNRYNNLQ 142 89************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MEFFDATSSS SYPFISTNHD EGTKPLDLFP NENQNGAFEP LPLISSLLRS PEAPNYSDQN 60 PKPHGVSDDH NDDVTVALHI GLPEYSSDHG FIMNPNESTA VSNDVVAVEK YWIPTQEQIL 120 VGFTHFSCHV CFKTFNRYNN LQVQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34790.1 | 2e-20 | C2H2 family protein |