PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON48454.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 444aa MW: 50253.4 Da PI: 5.9069

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON48454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.5e-52	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yLkkkv++++++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + PON48454.1 15 VPPGFRFHPTEEELLQYYLKKKVSNQSIDL-DVIRDVDLNKLEPWDIQEKCKIgttPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYS-N 111 69**************************.9***********964444222455**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g++ktLvfykgrap+g k+dW+mheyrl PON48454.1 112 SKRIGMRKTLVFYKGRAPHGLKSDWIMHEYRL 143 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MPENMSISVN GQSQVPPGFR FHPTEEELLQ YYLKKKVSNQ SIDLDVIRDV DLNKLEPWDI 60 QEKCKIGTTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS NSKRIGMRKT 120 LVFYKGRAPH GLKSDWIMHE YRLDDNINDT NIHSSSTVMG EIAQEEGWVV CRIFKKKNHH 180 KNLDSPVMSS VTITTETTDE MTMFDSIGNE GALEQIFQYM GKTACKEEET NNEAAATEND 240 TNDDTNDDNN NNNRTSSTTR FLPISLNMNM NNNFNGCGHE RFLKLPSLES PNSTSSQNCY 300 NPINNDDHQG MIGDDHYLPN FGFNHHDHQI MDSNQLMIMT NWTSLDRLVA SQLNGQNEVS 360 RQLACFSSNI NTTNNGNHDH DHLQVPAAAT LRSSSVSSSK PYYHSAAQEY SNEMELWSTF 420 ARSSSSSSSL LSSDPICHVS NAPL

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MPENMSISVN GQSQVPPGFR FHPTEEELLQ YYLKKKVSNQ SIDLDVIRDV DLNKLEPWDI  60
QEKCKIGTTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS NSKRIGMRKT  120
LVFYKGRAPH GLKSDWIMHE YRLDDNINDT NIHSSSTVMG EIAQEEGWVV CRIFKKKNHH  180
KNLDSPVMSS VTITTETTDE MTMFDSIGNE GALEQIFQYM GKTACKEEET NNEAAATEND  240
TNDDTNDDNN NNNRTSSTTR FLPISLNMNM NNNFNGCGHE RFLKLPSLES PNSTSSQNCY  300
NPINNDDHQG MIGDDHYLPN FGFNHHDHQI MDSNQLMIMT NWTSLDRLVA SQLNGQNEVS  360
RQLACFSSNI NTTNNGNHDH DHLQVPAAAT LRSSSVSSSK PYYHSAAQEY SNEMELWSTF  420
ARSSSSSSSL LSSDPICHVS NAPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-119	NAC family protein