PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON44126.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 280aa    MW: 31588.8 Da    PI: 8.1294
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON44126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.66.2e-111401804990
        FAR1  49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  ++r++r+etr+gC+a+++++ e +gkw+++k+ leHnH+l 
  PON44126.1 140 PNKRKKRTETRIGCNANVQIQFE-NGKWVIAKCFLEHNHDLE 180
                 45999*****************9.***************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MESDVVCIYH VAFLGSDKVS VIFLPAYSVG VRSMKWLVEV PYHVVYGASD VEDNLNKNNS  60
NYYGSHLALH NLGEKIPSLS KEIRSKLPAN EKRGEANCLV PQVGMRFSSE EEAYNFYKTY  120
AKEIGFTVRK GKGFKSIKSP NKRKKRTETR IGCNANVQIQ FENGKWVIAK CFLEHNHDLE  180
RPLQNHTVTC AENFEGATND ECRKIVEGHL ETASTEIDGS TYVFHVNELS MVREVIPSLV  240
VDVQDTLLQE WASTSVKSTS LLDWARRGKK SSYNVTRAAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-14FAR1 family protein