PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON43793.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HD-ZIP

Protein Properties

Length: 287aa MW: 32208.8 Da PI: 4.377

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON43793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.4	8.1e-21	68	121	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ +++++LAkklgL+ rqV vWFqNrRa++k PON43793.1 68 KKRRLTPEQVHLLEKSFEAENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWK 121 5678*************************************************9 PP
2	HD-ZIP_I/II	134.8	3.1e-43	67	159	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqv+lLE+sFe+e+kLep+rK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l+++ +++ ke+++L++e+++ PON43793.1 67 EKKRRLTPEQVHLLEKSFEAENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDSLSANYDSILKENDKLKSEVAS 159 69**************************************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MESGRLFFDP TSGCHGGNML FLGNGDPVFR GPTGSMMSME ESSKRRPFFS SPEDLYDEEY 60 YDEQLPEKKR RLTPEQVHLL EKSFEAENKL EPDRKTQLAK KLGLQPRQVA VWFQNRRARW 120 KTKQLERDYD LLKSTYDSLS ANYDSILKEN DKLKSEVASL MEKLKAKEEA GVVPPPVQKP 180 ETLPGDMNEI MGTQFSVKVE DRLSTGSGGS AVVDEEGPQL VDSGDSYFQS CVQYPAGCMA 240 AVDGGVQSEE DDGSDDGRSY FSVDVFAAAE RQQQAEEGEA LGWWVWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	124	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	3e-91	HD-ZIP family protein