PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON37628.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

C2H2

Protein Properties

Length: 332aa MW: 35477.6 Da PI: 9.9231

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON37628.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.00021	112	134	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs++ L H++ H PON37628.1 112 FSCNFCKREFSTSQALGGHQNAH 134 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEELVAEACP SEASSISAAS EGDENKKIMK MKMKENVKAG GKQISEADKP GPSSRLLLDL 60 KLSSDKSSAP GGGSGSKMEL NLFSSHHVNP SSSPDQSNKE EKKPAEVQTR VFSCNFCKRE 120 FSTSQALGGH QNAHKQERAL VKRRQGIDVG AFGHHHFSPY YPYSTNISPH YPLYGSFNRS 180 PLGVRMDSMI HKPNSYPWST PPPGGYRFGH DLGSGGSVGG WSRQPPVLNS AQRSIERLNL 240 EGFRPRNNGV GALGRLGGVT SSSTSFGTSS RIEDISGALC NFGGSSSTST VTTSNVPINR 300 PSIGGADLIR RSEPLKTDRS GAPTGLDLSL KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80730.1	2e-19	C2H2 family protein