PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON33157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 218aa MW: 25390.4 Da PI: 8.6591 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.8 | 1.1e-17 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W+t a+ g++Rt+k+c++rw++yl PON33157.1 17 KGPWTMEEDLILINYIANHGEGVWNTLAKAAGLKRTGKSCRLRWLNYL 64 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.8 | 9.2e-17 | 70 | 113 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++++ ++++++G++ W++Ia++++ gRt++++k++w++ PON33157.1 70 RGNITNEEQLIIMELHAKWGNR-WSKIAKHLP-GRTDNEIKNYWRT 113 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MDHKKACNSS QELEVRKGPW TMEEDLILIN YIANHGEGVW NTLAKAAGLK RTGKSCRLRW 60 LNYLRPDVRR GNITNEEQLI IMELHAKWGN RWSKIAKHLP GRTDNEIKNY WRTRIQKHIK 120 QADHHHNHQI NVNHRQSSEM INDQGSTSSQ LSSGTADAME SYSPRLTSYQ GINYMDHHQT 180 NINNNYPMVL PPVATSNIDQ NYNWTMEDIW SMQLLNSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 2e-87 | MYB family protein |