PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI49065.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | ERF | ||||||||
Protein Properties | Length: 102aa MW: 11282.6 Da PI: 10.8756 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.2 | 2.3e-19 | 47 | 97 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 gy+GVr+++ +g+++AeIrd + ng +r++lg++ ta+ Aa a+++a+ kl+g MCI49065.1 47 GYRGVRRRP-WGKYAAEIRDSKRNG--ARVWLGTYETAKNAALAYDRAAFKLRG 97 8********.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
TTTGWFPGNN NEVNNVDVAV KIEDQGQSSG TLEARVIHAQ TNSKSLGYRG VRRRPWGKYA 60 AEIRDSKRNG ARVWLGTYET AKNAALAYDR AAFKLRGSKA KL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 3e-31 | ERF family protein |