PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI35001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 84aa MW: 9716.22 Da PI: 10.3008 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.1 | 2.3e-19 | 3 | 50 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +l+++v+++G g+W+++ + g+ R++k+c++rw ++l MCI35001.1 3 KGPWTPQEDMILIEYVNKHGEGNWNSVQKNSGLLRCGKSCRLRWANHL 50 79******************************99**********9996 PP | |||||||
2 | Myb_DNA-binding | 24.5 | 6.3e-08 | 56 | 83 | 1 | 29 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+++++E++++++++++lG++ W++ a+ MCI35001.1 56 KGSFSEDEEKIIIELHAKLGNK-WARMAA 83 799*******************.**9885 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 84 aa Download sequence |
MKKGPWTPQE DMILIEYVNK HGEGNWNSVQ KNSGLLRCGK SCRLRWANHL RPNLKKGSFS 60 EDEEKIIIEL HAKLGNKWAR MAAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G32460.2 | 2e-50 | MYB family protein |