PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI23379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | ERF | ||||||||
Protein Properties | Length: 134aa MW: 15190.5 Da PI: 11.0608 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53 | 8.7e-17 | 53 | 103 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ + +Wv+e r+p +k+++++lg+f t e+Aa+a++ a+ +l+g MCI23379.1 53 PVYRGVRRRN-NDKWVCEMREP---NKKTKIWLGTFPTVEMAARAHDVAAMALRG 103 68*****887.8******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MFPTNNSSSS SDMSLSNSEG SHWMPVVNEE VRLAATTPKK RAGRKKFKET RHPVYRGVRR 60 RNNDKWVCEM REPNKKTKIW LGTFPTVEMA ARAHDVAAMA LRGRYACLNF ADSVWRLPKP 120 ATAQAKDIQK AATL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 9e-47 | ERF family protein |