PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI20771.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 151aa MW: 16617.9 Da PI: 7.8653 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 159.5 | 2.9e-49 | 1 | 151 | 38 | 178 |
GRAS 38 mqRlaayfteALaarlarsvselykalppsetseknsseelaal..............klfsevsPilkfshltaNqaIleavegeervHiiDfdisqG 122 mqR+a++fte L+arla + ++ +++ + s+t++++ss++ + + ++ ++++P++kf+h+taNqaI ea+e+eervH+iD+di qG MCI20771.1 1 MQRVASCFTESLSARLAATLTTKSSSNKKSTTPSSSSSSSSSCFssfpsnpmevlkiyQIVYQACPYIKFAHFTANQAIFEAFETEERVHVIDLDILQG 99 8*****************766666666555555444333333334566666666666699*************************************** PP GRAS 123 lQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178 QWpa++qaLa+R++g+p lRiTgvg+ e+++etg+ L+++A++l++pfef MCI20771.1 100 YQWPAFMQALAARSGGAPFLRITGVGP----CIESVRETGRCLTELAHSLRIPFEF 151 ***************************....************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MQRVASCFTE SLSARLAATL TTKSSSNKKS TTPSSSSSSS SSCFSSFPSN PMEVLKIYQI 60 VYQACPYIKF AHFTANQAIF EAFETEERVH VIDLDILQGY QWPAFMQALA ARSGGAPFLR 120 ITGVGPCIES VRETGRCLTE LAHSLRIPFE F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01570.1 | 4e-32 | GRAS family protein |