PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17871.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 93aa    MW: 10226 Da    PI: 10.5325
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.86.3e-0671901029
                HHHHHHHHHHHHHHHCTSCC CS
         HLH 10 rrRRdriNsafeeLrellPk 29
                r+RR+riN+++  L+ l+P+
  MCI17871.1 71 RKRRERINERLRILQNLVPN 90
                9******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MKNARSKKNL QKVASNEEID NGESNGNSSS SNIYEDDNGS QENSGGTTLN SNGKTRASRG  60
SATDPQSLYA RKRRERINER LRILQNLVPN GTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.18e-14bHLH family protein