PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI16933.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YA
Protein Properties Length: 56aa    MW: 6363.58 Da    PI: 11.6263
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI16933.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA56.21.1e-172256136
   CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36
                d p+YVNaKQy++Il+RRq+Rakle+++kl +ksrk
  MCI16933.1 22 DGPIYVNAKQYHGILRRRQSRAKLEAQNKL-IKSRK 56
                57****************************.99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 56 aa     Download sequence    
MMPQMMGLAS ARVALPLDLA QDGPIYVNAK QYHGILRRRQ SRAKLEAQNK LIKSRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.13e-20NF-YA family protein