PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI12569.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 200aa MW: 22308.8 Da PI: 4.6468 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 25.5 | 1.5e-08 | 125 | 184 | 1 | 59 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel.aspdg.dpmqRlaayfteALaarlarsvse 59 lv++L++cA+ ++ g+ +la +l++ ++ l a+ + + + ++a yf AL++r+++ +++ MCI12569.1 125 LVHTLMTCADSLQRGNIQLAGSLIEGMQGLlANMNTnSGIGKVAGYFIDALNRRIFG-QNN 184 689*************************99765555489****************99.444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MEIEIDSVSS PSKVKEIDGL LADVGYKVKS SELHQVAQNI ERLENVIVNS SSSDISQFAS 60 DTVHYDPSDI GNWVDNLLSE FDHTNSLPYD FSQLPLPDLA QDQHQHHHHQ LKVVTTVEED 120 SAIKLVHTLM TCADSLQRGN IQLAGSLIEG MQGLLANMNT NSGIGKVAGY FIDALNRRIF 180 GQNNIIHIEN DVLYHHYYEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 7e-23 | GRAS family protein |