PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI07120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | B3 | ||||||||
Protein Properties | Length: 231aa MW: 25796.6 Da PI: 9.606 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 73.1 | 3.5e-23 | 113 | 214 | 2 | 99 |
EEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 fk+lt+sd+++ g +++p+ +a+++ + k++ ++l+++d +g++W++++iy++ ++r+++t+GW++Fv+ ++L +gD++vF ++ ++ +v MCI07120.1 113 FKTLTRSDANNGGAFSVPRGCANKIfppldlKAKPAPFQELSFTDVHGEEWKFRHIYSGAPQRHLITSGWSKFVDKKKLVVGDSLVFL--KNPAGRIFV 209 69***************************9966777778*************************************************..779999*** PP EEE-S CS B3 95 kvfrk 99 +++rk MCI07120.1 210 GIRRK 214 **996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MALQQPSRVD PKLWQRCAGD SIKIPKLHSK VYYFPQGHLE HSNPSPSTQS LSLINGYRPF 60 IPCIISAIDL LADPHTDEVF AKLLLTPVAD GTIEPRDVPY EDQENNVEVV SSFKTLTRSD 120 ANNGGAFSVP RGCANKIFPP LDLKAKPAPF QELSFTDVHG EEWKFRHIYS GAPQRHLITS 180 GWSKFVDKKK LVVGDSLVFL KNPAGRIFVG IRRKFDASRS GKIREKAVME A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77850.1 | 2e-70 | ARF family protein |