PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI04078.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | B3 | ||||||||
Protein Properties | Length: 182aa MW: 20271.2 Da PI: 9.2916 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 79.3 | 4e-25 | 72 | 173 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+ltpsd+++ g +++p+ +a+++ + ++ + l+++d +g +We+++iyr++++r++lt+GW++Fv+ ++L +gD+vvF+ +++++ + MCI04078.1 72 FAKILTPSDANNGGGFSVPRFCADSIfppldytMDPPFQ--SLSITDVHGLTWEFRHIYRGTPRRHLLTTGWSRFVNGKKLVAGDSVVFM--KNTRGAM 166 89*********************999****995444444..6999*********************************************..7799999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ MCI04078.1 167 FVGIRRA 173 ****996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MDQASSLPNN LSPQLLSRPY ILCTVSGVHF LADPKTDEVF AKLFLQPLND FTAVFSRAVI 60 QEVDDGERIS SFAKILTPSD ANNGGGFSVP RFCADSIFPP LDYTMDPPFQ SLSITDVHGL 120 TWEFRHIYRG TPRRHLLTTG WSRFVNGKKL VAGDSVVFMK NTRGAMFVGI RRAVRFVPAR 180 SC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77850.1 | 1e-66 | ARF family protein |