PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI01625.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 159aa    MW: 18035.1 Da    PI: 5.2454
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI01625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.41.9e-10139159121
                 ---SS-EEEEEEE--TT-SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                 ldDgy+WrKYGqK vk+s++p
  MCI01625.1 139 LDDGYRWRKYGQKAVKNSTYP 159
                 59****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MNQECSMESQ DPPNPPPPLM MPPPPPPPQN NTFFTPLQNY PLESQDQCLG DIDWGNFFLG  60
QNNNNNLLVG DAKETLMDNI QCTSSSSNLL VNNNESGSYQ LHEVEKGNKE EKRIKGGRLK  120
KTTKVPRFAF QTRSVDDILD DGYRWRKYGQ KAVKNSTYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41570.17e-16WRKY family protein