PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCH99925.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 148aa MW: 17179.7 Da PI: 9.8025 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.6 | 1e-05 | 68 | 90 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F k + ++H +++ MCH99925.1 68 FMCRKCGKTFAVKGDWRTHEKNC 90 89*****************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 148 aa Download sequence |
MHMWGHGSEF RKGPDSLRGT QPAAMLRLPC YCCAQGCKNN INHPRAKPLK DFRTLQTHYK 60 RKHGTKPFMC RKCGKTFAVK GDWRTHEKNC GKFWYCTCGS DFKHKRSLKD HIRSFGKGHN 120 RLPSLDDRAF EEEKECVTCS DENEVART |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G08290.1 | 1e-85 | C2H2 family protein |