PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH99682.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Dof
Protein Properties Length: 277aa    MW: 30929.1 Da    PI: 7.8455
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH99682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.39.7e-402788263
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                +e+al+cprC+stntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  MCH99682.1 27 PEHALNCPRCNSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 88
                68899*****************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
QMSSQSSMEN MLGCSKEEQE RKPKPQPEHA LNCPRCNSTN TKFCYYNNYS LTQPRYFCKS  60
CRRYWTKGGT LRNVPVGGGC RKNKRSSSSS SSKRVQDQNQ TFTPNLSAFN NLPLSSYDHN  120
SNDFALALAR LQKQSCGQMG YDDNDLSILG NPQNHGFMDA IRSGLFLGNG LHYNNNVQNM  180
YGGYGNGGDN GEVNSCNNNN NNACGVSEEI MFPYDQEMNN CIATTNMKQE QSESKVFGGF  240
PWQLNGGTNM VELESTRASW NNGFTSPWQG LLHSPLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.15e-42Dof family protein