PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH99525.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

C2H2

Protein Properties

Length: 205aa MW: 22575.4 Da PI: 5.1641

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH99525.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.6	1.1e-05	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ Fs++ L H++ H MCH99525.1 63 FSCNYCHNKFSTQQALAGHQNAH 85 89******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
SSHTKEVVMN LKENEHKTQS SSNNNEGKNE NTSEENLPKS SSNNNEGKNE NTMEEKNSNS 60 RLFSCNYCHN KFSTQQALAG HQNAHRAERA LEKRRKERPL GVRMESLIRK PPSDSPNIGH 120 GALSLRDMLN PSLVSLKNNI EGCSNGVGVQ GIGGETTPRI EDDAGNKFVD FLNLGDSSNV 180 DTTSNIMDLN LNSNNEEESS NSESE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80730.1	1e-08	C2H2 family protein